SeqAn3
edit_distance_unbanded.hpp File Reference

Contains a pairwise alignment algorithm for edit distance but without band. More...

#include <algorithm>
#include <bitset>
#include <utility>
#include <range/v3/algorithm/copy.hpp>
#include <range/v3/utility/iterator.hpp>
#include <seqan3/alignment/configuration/all.hpp>
#include <seqan3/alignment/matrix/alignment_coordinate.hpp>
#include <seqan3/alignment/matrix/alignment_score_matrix.hpp>
#include <seqan3/alignment/matrix/alignment_trace_algorithms.hpp>
#include <seqan3/alignment/matrix/alignment_trace_matrix.hpp>
#include <seqan3/alignment/pairwise/align_result.hpp>
#include <seqan3/range/shortcuts.hpp>
#include <seqan3/std/ranges>
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Detailed Description

Contains a pairwise alignment algorithm for edit distance but without band.

Author
Marcel Ehrhardt <marcel.ehrhardt AT fu-berlin.de>