SeqAn3
seqan3::sequence_file_input_default_traits_aa Struct Reference

A traits type that specifies input as amino acids. More...

#include <seqan3/io/sequence_file/input.hpp>

Inheritance diagram for seqan3::sequence_file_input_default_traits_aa:
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Public Types

Member types
using sequence_alphabet = aa27
 
using sequence_legal_alphabet = aa27
 
Member types
template<typename _sequence_alphabet >
using sequence_container = std::vector< _sequence_alphabet >
 
template<typename _sequence_container >
using sequence_container_container = concatenated_sequences< _sequence_container >
 
using id_alphabet = char
 
template<typename _id_alphabet >
using id_container = std::basic_string< _id_alphabet >
 
template<typename _id_container >
using id_container_container = concatenated_sequences< _id_container >
 
using quality_alphabet = phred42
 
template<typename _quality_alphabet >
using quality_container = std::vector< _quality_alphabet >
 
template<typename _quality_container >
using quality_container_container = concatenated_sequences< _quality_container >
 

Detailed Description

A traits type that specifies input as amino acids.


The documentation for this struct was generated from the following file: