A special sub namespace for the alignment configurations. More...
Enumerations | |
enum | id : uint8_t { id::gap, id::sequence_ends, id::score, id::global, id::output, id::max_error, id::DEV } |
Specifies an id for every configuration element. More... | |
Variables | |
constexpr detail::align_config_band_adaptor< seqan3::band_static > | band_static |
A configuration adaptor for a static band. | |
constexpr detail::configuration | edit |
Shortcut for edit distance configuration. More... | |
constexpr detail::align_config_gap_adaptor< seqan3::detail::align_config_gap > | gap |
A configuration adaptor for gaps. | |
constexpr detail::align_config_global_adaptor | global |
A configuration adaptor for global alignment. | |
constexpr detail::align_config_max_error_adaptor | max_error |
A configuration adaptor for maximal errors. | |
template<align_result_key e> | |
constexpr detail::align_config_output_adaptor< e > | output |
A configuration adaptor for alignment output. | |
constexpr detail::align_config_score_adaptor | score |
A configuration adaptor for alignment scoring. | |
template<free_ends_at val = free_ends_at::none> | |
constexpr detail::align_config_sequence_ends_adaptor< val > | sequence_ends |
A configuration adaptor for gaps at the sequence ends. More... | |
A special sub namespace for the alignment configurations.
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inline |
Shortcut for edit distance configuration.