Contains alignment functionality. More...
Modules | |
Aligned Sequence | |
Provides seqan3::aligned_sequence_concept, as well as various ranges that model it. | |
Configuration | |
Data structures and utility functions for configuring alignment algorithm. | |
Pairwise | |
Provides the algorithmic components for the computation of pairwise alignments. | |
Scoring | |
Provides the data structures used for scoring alphabets and sequences. | |
Classes | |
struct | seqan3::band_static< value_t > |
Data structure for a static band. More... | |
struct | seqan3::lower_bound< value_t > |
Type for a lower boundary. More... | |
struct | seqan3::upper_bound< value_t > |
Type for an upper boundary. More... | |
Contains alignment functionality.
The alignment module contains concepts, functions and classes that are related to the computation of pairwise and multiple sequence alignments.