SeqAn3
align_config_score.hpp
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34 
40 #pragma once
41 
47 
48 namespace seqan3::detail
49 {
54 template <typename scoring_scheme_type>
55 struct align_config_score
56 {
58  scoring_scheme_type value;
59 };
60 
64 struct align_config_score_adaptor : public configuration_fn_base<align_config_score_adaptor>
65 {
73  template <typename configuration_type, typename scoring_scheme_type>
75  requires is_algorithm_configuration_v<remove_cvref_t<configuration_type>>
77  constexpr auto invoke(configuration_type && cfg, scoring_scheme_type const scheme) const
78  {
79  static_assert(is_valid_alignment_configuration_v<align_cfg::id::score, remove_cvref_t<configuration_type>>,
80  SEQAN3_INVALID_CONFIG(align_cfg::id::score));
81 
82  return std::forward<configuration_type>(cfg).push_front(align_config_score<scoring_scheme_type>
83  {std::move(scheme)});
84  }
85 };
86 
90 template <>
91 struct on_align_config<align_cfg::id::score>
92 {
94  template <config_element_concept t>
95  using invoke = typename is_type_specialisation_of<t, align_config_score>::type;
96 };
97 
102 template <typename scoring_scheme_type>
103 struct align_config_type_to_id<align_config_score<scoring_scheme_type>>
104 {
106  static constexpr align_cfg::id value = align_cfg::id::score;
107 };
108 
109 } // namespace seqan3::detail
110 
111 namespace seqan3::align_cfg
112 {
113 
117 inline constexpr detail::align_config_score_adaptor score;
118 
119 } // namespace seqan3::align_cfg
Provides seqan3::type_list and auxiliary metafunctions.
A special sub namespace for the alignment configurations.
Definition: align_config_band.hpp:151
Identifier for score configuration.
Provides functionality to access get function by enum values.
Provides seqan3::scoring_scheme_concept.
Definition: aligned_sequence_concept.hpp:288
id
Specifies an id for every configuration element.
Definition: utility.hpp:66
Meta-Header for components of the algorithm submodule.
Contains seqan3::dna4, container aliases and string literals.
constexpr detail::align_config_score_adaptor score
A configuration adaptor for alignment scoring.
Definition: align_config_score.hpp:117