SeqAn3
Alignment

Contains alignment functionality. More...

Collaboration diagram for Alignment:

Modules

 Aligned Sequence
 Provides seqan3::aligned_sequence_concept, as well as various ranges that model it.
 
 Configuration
 Data structures and utility functions for configuring alignment algorithm.
 
 Pairwise
 Provides the algorithmic components for the computation of pairwise alignments.
 
 Scoring
 Provides the data structures used for scoring alphabets and sequences.
 

Classes

struct  seqan3::band_static< value_t >
 Data structure for a static band. More...
 
struct  seqan3::lower_bound< value_t >
 Type for a lower boundary. More...
 
struct  seqan3::upper_bound< value_t >
 Type for an upper boundary. More...
 

Detailed Description

Contains alignment functionality.

The alignment module contains concepts, functions and classes that are related to the computation of pairwise and multiple sequence alignments.

Todo:
Write detailed landing page.