SeqAn3
seqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t > Member List

This is the complete list of members for seqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >, including all inherited members.

alphabet_base() noexcept (defined in seqan3::alphabet_base< derived_type, size, char_t >)seqan3::alphabet_base< derived_type, size, char_t >inline
alphabet_base(alphabet_base const &)=default (defined in seqan3::alphabet_base< derived_type, size, char_t >)seqan3::alphabet_base< derived_type, size, char_t >
alphabet_base(alphabet_base &&)=default (defined in seqan3::alphabet_base< derived_type, size, char_t >)seqan3::alphabet_base< derived_type, size, char_t >
alphabet_size_vseqan3::semi_alphabet_conceptrelated
assign_char(char_type const c) (defined in seqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >)seqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >inline
seqan3::rna_structure_concept::assign_char(alphabet_concept &&alph, char_type const chr)seqan3::alphabet_conceptrelated
cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >::assign_char(std::conditional_t< std::Same< char_type, void >, char, char_type > const c) noexceptseqan3::alphabet_base< derived_type, size, char_t >inline
seqan3::assign_rank(semi_alphabet_concept &&alph, rank_type const rank)seqan3::semi_alphabet_conceptrelated
cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >::seqan3::alphabet_base::assign_rank(rank_type const c) noexceptseqan3::alphabet_base< derived_type, size, char_t >inline
cartesian_composition(component_types ... components)seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >inline
cartesian_composition(component_type const alph)seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >inlineexplicit
cartesian_composition(indirect_component_type const alph)seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >inlineexplicit
char_type typedefseqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >
complement() const noexceptseqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >inline
is_pair_close() const noexceptseqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >inline
seqan3::rna_structure_concept::is_pair_close(structure_type const alph) requires requires(structure_type alph)seqan3::rna_structure_conceptrelated
is_pair_open() const noexceptseqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >inline
seqan3::rna_structure_concept::is_pair_open(structure_type const alph) requires requires(structure_type alph)seqan3::rna_structure_conceptrelated
is_unpaired() const noexceptseqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >inline
seqan3::rna_structure_concept::is_unpaired(structure_type const alph) requires requires(structure_type alph)seqan3::rna_structure_conceptrelated
max_pseudoknot_depthseqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >static
max_pseudoknot_depth_vseqan3::rna_structure_conceptrelated
operator type() constseqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >inline
seqan3::operator!=(type const &lhs, type const &rhs)std::EqualityComparablerelated
operator!=(indirect_component_type const &rhs) const noexcept (defined in seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >)seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >inline
operator!=(indirect_component_type const &lhs, cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, indirect_component_types... > const &rhs) (defined in seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >)seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >related
seqan3::operator<(type const &lhs, type const &rhs)std::StrictTotallyOrderedrelated
operator<(indirect_component_type const &rhs) const noexcept (defined in seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >)seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >inline
operator<(indirect_component_type const &lhs, cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, indirect_component_types... > const &rhs) (defined in seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >)seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >related
seqan3::operator<=(type const &lhs, type const &rhs)std::StrictTotallyOrderedrelated
operator<=(indirect_component_type const &rhs) const noexcept (defined in seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >)seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >inline
operator<=(indirect_component_type const &lhs, cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, indirect_component_types... > const &rhs) (defined in seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >)seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >related
operator=(structured_rna const &)=default (defined in seqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >)seqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >
operator=(structured_rna &&)=default (defined in seqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >)seqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >
operator=(component_type const alph)seqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >inline
operator=(indirect_component_type const alph)seqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >inline
seqan3::rna_structure_concept::operator=(t1 const &rhs)std::Assignable
operator=(alphabet_base const &)=default (defined in seqan3::alphabet_base< derived_type, size, char_t >)seqan3::alphabet_base< derived_type, size, char_t >
operator=(alphabet_base &&)=default (defined in seqan3::alphabet_base< derived_type, size, char_t >)seqan3::alphabet_base< derived_type, size, char_t >
seqan3::operator==(type const &lhs, type const &rhs)std::EqualityComparablerelated
operator==(indirect_component_type const &rhs) const noexcept (defined in seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >)seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >inline
operator==(indirect_component_type const &lhs, cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, component_types... > const &rhs) (defined in seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >)seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >related
seqan3::operator>(type const &lhs, type const &rhs)std::StrictTotallyOrderedrelated
operator>(indirect_component_type const &rhs) const noexcept (defined in seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >)seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >inline
operator>(indirect_component_type const &lhs, cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, indirect_component_types... > const &rhs) (defined in seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >)seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >related
seqan3::operator>=(type const &lhs, type const &rhs)std::StrictTotallyOrderedrelated
operator>=(indirect_component_type const &rhs) const noexcept (defined in seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >)seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >inline
operator>=(indirect_component_type const &lhs, cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, indirect_component_types... > const &rhs) (defined in seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >)seqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >related
pseudoknot_id() const noexceptseqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >inline
seqan3::rna_structure_concept::pseudoknot_id(alphabet_type_with_pseudoknot_attribute const alph)seqan3::rna_structure_conceptrelated
seqan3::rna_structure_concept::pseudoknot_id(structure_type const alph)seqan3::rna_structure_conceptrelated
rank_type typedefseqan3::cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >
sequence_alphabet_type typedefseqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >
structure_alphabet_type typedefseqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >
structured_rna() (defined in seqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >)seqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >inline
structured_rna(structured_rna const &)=default (defined in seqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >)seqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >
structured_rna(structured_rna &&)=default (defined in seqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >)seqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >
structured_rna(component_type const alph)seqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >inline
structured_rna(indirect_component_type const alph)seqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >inline
structured_rna(sequence_alphabet_type &&, structure_alphabet_type &&) -> structured_rna< std::decay_t< sequence_alphabet_type >, std::decay_t< structure_alphabet_type >>seqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >related
swap(t &lhs, t &rhs)std::Swappablerelated
to_char() const noexceptseqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >inline
seqan3::rna_structure_concept::to_char(alphabet_concept const alph)seqan3::alphabet_conceptrelated
seqan3::to_rank(semi_alphabet_concept const alph)seqan3::semi_alphabet_conceptrelated
cartesian_composition< structured_rna< sequence_alphabet_t, structure_alphabet_t >, sequence_alphabet_t, structure_alphabet_t >::seqan3::alphabet_base::to_rank() const noexceptseqan3::alphabet_base< derived_type, size, char_t >inline
underlying_char_t typedefseqan3::alphabet_conceptrelated
underlying_rank_t typedefseqan3::semi_alphabet_conceptrelated
value_sizeseqan3::alphabet_base< derived_type, size, char_t >static
~alphabet_base()=default (defined in seqan3::alphabet_base< derived_type, size, char_t >)seqan3::alphabet_base< derived_type, size, char_t >
~structured_rna()=default (defined in seqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >)seqan3::structured_rna< sequence_alphabet_t, structure_alphabet_t >