SeqAn3
format_sam.hpp File Reference

Provides the seqan3::alignment_file_format_sam class. More...

#include <iterator>
#include <string>
#include <string_view>
#include <vector>
#include <range/v3/algorithm/copy.hpp>
#include <range/v3/view/remove_if.hpp>
#include <seqan3/core/concept/tuple.hpp>
#include <seqan3/core/metafunction/range.hpp>
#include <seqan3/io/alignment_file/detail.hpp>
#include <seqan3/io/alignment_file/header.hpp>
#include <seqan3/io/alignment_file/output_options.hpp>
#include <seqan3/io/alignment_file/sam_tag_dictionary.hpp>
#include <seqan3/io/detail/ignore_output_iterator.hpp>
#include <seqan3/io/detail/misc.hpp>
#include <seqan3/io/stream/parse_condition.hpp>
#include <seqan3/range/view/char_to.hpp>
#include <seqan3/range/view/get.hpp>
#include <seqan3/range/view/take_until.hpp>
#include <seqan3/range/view/to_char.hpp>
#include <seqan3/std/ranges>
#include <seqan3/std/concepts>
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Classes

class  seqan3::alignment_file_format_sam
 The SAM format. More...
 

Namespaces

 seqan3
 The main SeqAn3 namespace.
 

Detailed Description

Provides the seqan3::alignment_file_format_sam class.

Author
Svenja Mehringer <avenja.mehringer AT fu-berlin.de>